BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB011A03LP1|AL426128
(813 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1798 1612 0.0
>3x_Contig1798
Length = 38968
Score = 1612 bits (813), Expect = 0.0
Identities = 813/813 (100%)
Strand = Plus / Plus
Query: 1 gatccgctctaagttatgttttttatcttttgaagaggaagttaaggtcatggtatacca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3883 gatccgctctaagttatgttttttatcttttgaagaggaagttaaggtcatggtatacca 3942
Query: 61 tttaattgcagtttgttcccagaaagtcaaaggatcctttttcaaacggtcaacatcgtt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3943 tttaattgcagtttgttcccagaaagtcaaaggatcctttttcaaacggtcaacatcgtt 4002
Query: 121 atcactgccaaggaacaagttaacattaataacctctgcatgctcaacattatccttgat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4003 atcactgccaaggaacaagttaacattaataacctctgcatgctcaacattatccttgat 4062
Query: 181 gagtttcaaatactcatcgtattggctgaacataatggagtattttttagcatatggcat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4063 gagtttcaaatactcatcgtattggctgaacataatggagtattttttagcatatggcat 4122
Query: 241 gaaagtcttcaattgatcttgatggagaactttatcgaacttcttaacaattttccgaaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4123 gaaagtcttcaattgatcttgatggagaactttatcgaacttcttaacaattttccgaaa 4182
Query: 301 tccattaacgttcaaatctctatagtttttaagcaattggaggtataagtagaaatcgag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4183 tccattaacgttcaaatctctatagtttttaagcaattggaggtataagtagaaatcgag 4242
Query: 361 aatcgcgtcagagagctgctgcctaatctgagataaagagagaggagaggtttcggtttg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4243 aatcgcgtcagagagctgctgcctaatctgagataaagagagaggagaggtttcggtttg 4302
Query: 421 aaaagtttcctggccccttgaagctcgtttacggtcctttttagctaaaagagggtctct 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4303 aaaagtttcctggccccttgaagctcgtttacggtcctttttagctaaaagagggtctct 4362
Query: 481 attcttccaagaaacgggcatagatggacataagttgtgggtcactaaccaccgcttgag 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4363 attcttccaagaaacgggcatagatggacataagttgtgggtcactaaccaccgcttgag 4422
Query: 541 atcgtaccagattttttttttgacggtatccttcaaggctatcggactaaaatttgggaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4423 atcgtaccagattttttttttgacggtatccttcaaggctatcggactaaaatttgggaa 4482
Query: 601 tatcgatccatacgaatctggggctctcgacaaactggcgatacggtactcgtccagcga 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4483 tatcgatccatacgaatctggggctctcgacaaactggcgatacggtactcgtccagcga 4542
Query: 661 atctaatctactacgcttatctgcttccagcacatacaaatggatctgcctctgcaattt 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4543 atctaatctactacgcttatctgcttccagcacatacaaatggatctgcctctgcaattt 4602
Query: 721 atgatatttagctctgtatttagagagttgccattcataaaactcatcgcagttcttcaa 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4603 atgatatttagctctgtatttagagagttgccattcataaaactcatcgcagttcttcaa 4662
Query: 781 ctgatctcgcacaagccaatcatcaatgaattc 813
|||||||||||||||||||||||||||||||||
Sbjct: 4663 ctgatctcgcacaagccaatcatcaatgaattc 4695
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7132
Number of Sequences: 1807
Number of extensions: 7132
Number of successful extensions: 42
Number of sequences better than 1.0e-20: 1
length of query: 813
length of database: 10,358,551
effective HSP length: 16
effective length of query: 797
effective length of database: 10,329,639
effective search space: 8232722283
effective search space used: 8232722283
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)